Publications


  1. Gonzalez TL, Willson BE, Wang ET, Taylor KD, Novoa A, Swarna A, Ortiz JC, Zeno GJ, Jefferies CA, Lawrenson K, Rotter JI, Chen YDI, Williams J III, Cui J, Goodarzi MO, Pisarska MD. “Sexually dimorphic DNA methylation and gene expression patterns in human first trimester placenta” Biology of Sex Differences, 2024 Aug 16;15(1):63. [PMID: 39152463; PMCID: PMC11328442]
  2. Flowers AE, Gonzalez TL, Wang T, Santiskulvong C, Clark EL, Novoa A, Jefferies CA, Lawrenson K, Chan JL, Joshi NV, Zhu Y, Tseng HR, Wang ET, Ishimori M, Karumanchi SA, Williams J III, Pisarska MD. "High-throughput mRNA sequencing of human placenta shows sex differences across gestation." Placenta, 2024 Mar 21:150:8-21. Online ahead of print. [PMID: 38537412]
  3. Gonzalez TL, Wertheimer S, Flowers AE, Wang Y, Santiskulvong C, Clark EL, Jefferies CA, Lawrenson K, Chan JL, Joshi NV, Zhu Y, Tseng HR, Karumanchi SA, Williams J III, Pisarska MD. "High-throughput mRNA-seq atlas of human placenta shows vast transcriptome remodeling from first to third trimester." Biology of Reproduction, 2024 Jan 25;ioae007. Online ahead of print. [PMID: 38271627]
    • Pre-print version
    • Peer-reviewed and published at Biology of Reproduction 
      • [PMID: 38271627] https://doi.org/10.1093/biolre/ioae007 
      • Similar to pre-print but includes specific genes used for the decidua/villi cleanup for sample quality control, more details on the long noncoding RNAs, comparisons to single cell RNA-seq data, immunofluorescence for select genes, and improved gene labeling for the main figures.
    • NCBI GEO accession GSE247382 (167 samples) = Bulk mRNA-seq
      • 124 first trimester placenta ("CVS_")
      • 43 third trimester placenta ("PL_")
         
  4. Schaub AM, Gonzalez TL, Dorfman AE, Novoa AG,  Hussaini RA, Harakuni PM, Khan MH, Shabani BJ, Swarna A, Wang ET, Chan JL, Williams JW III, Pisarska MD. "A systematic review of genome-wide analyses of methylation changes associated with assisted reproductive technologies in various tissues." Fertility and Sterility. 2024 Jan;121(1):80-94. [PMID: 37827482]
  5. Gonzalez TL, Schaub AM, Lee B, Cui J, Taylor KD, Dorfman AE, Goodarzi MO, Wang ET, Chen YDI, Rotter JI, Hussaini R, Harakuni PM, Khan MH, Rich SS, Farber CR, Williams J III, Pisarska MD.  "Infertility and treatments utilized have minimal effects on first trimester placenta DNA methylation and gene expression." Fertility and Sterility, 2023 Feb;119(2):301-312. [PMID: 36379261]
  6. Braun AE, Mitchel OR, Gonzalez TL, Sun T, Flowers AE, Pisarska MD, Winn WD. "Sex at the interface: the origin and impact of sex differences in the developing human placenta." Biol Sex Differ. 2022 Sep 16;13(1):50. doi: 10.1186/s13293-022-00459-7. [PMID: 36114567; PMCID: PMC9482177] Review.

  7. Flowers AE, Gonzalez TL, Joshi NV, Eisman LE, Clark EL, Buttle RA, Sauro E, DiPentino R, Lin Y, Wu D, Wang Y, Santiskulvong C, Tang J, Lee B, Sun T, Chan JL, Wang ET, Jefferies C, Lawrence K, Zhu Y, Afshar Y, Tseng H-R, Williams J, Pisarska MD. "Sex differences in microRNA expression in first and third trimester human placenta." Biology of Reproduction, 2022 Mar 19;106(3):551-567. [PMID: 35040930; PMCID: PMC9077118]
  8. Afshar Y, Dong J, Zhao P, Lei L, Wang S, Zhang RY, Zhang C, Yin O, Han CS, Einerson BD, Gonzalez TL, Zhang H, Zhou A, Yang Z, Chou S-J, Sun N, Cheng J, […], Pisarska MD, Tseng HR, Zhu Y. “Circulating trophoblast cell clusters for early detection of placenta accreta spectrum disorders.” Nature Communications, 2021 Aug 3;12(1):4408. [PMID: 34344888; PMCID: PMC8333096]

  9. Gonzalez TL, Eisman LE, Joshi JV, Flowers AE, Wu D, Wang Y, Santiskulvong C, Tang J, Buttle RA, Sauro E, Clark EL, DiPentino R, Jefferies CA, Chan JL, Lin Y, Zhu Y, Afshar Y, Tseng HR, Taylor K, Williams J III, Pisarska MD. “High-throughput miRNA-sequencing of the human placenta: expression throughout gestation.” Epigenomics, 2021 Jul;13(13):995-1012. [PMID: 34030457, PMCID: PMC8244582]
  10. Sun T*, Gonzalez TL*, Deng N, DiPentino R, Clark EL, Lee B, Tang J, Wang Y, Stripp BR, Yao C, Hsian-Rong T, Karumanchi SA, Koeppel AF, Turner SD, Farber CR, Rich SS, Wang ET, Williams J III, Pisarska MD. “Sexually dimorphic crosstalk at the maternal-fetal interface.” J Clin Endocrinol Metab, 2020, 12, e4831-e4847. [PMID: 32772088; PMCID: PMC7571453]
      *equal contribution
  11. Lee B, Koeppel AF, Wang ET, Gonzalez TL, Sun T, Kroener L, Lin Y, Joshi NV, Ghadiali T, Turner SD, Rich SS, Farber CR, Rotter JI, Ida Chen YD, Goodarzi MO, Guller S, Harwood B, Serna TB, Williams J 3rd, Pisarska MD. “Differential gene expression during placentation in pregnancies conceived with different fertility treatments compared with spontaneous pregnancies.” Fertility and Sterility, 2019 Mar;111(3):535-546. [PMID: 30611556; PMCID: PMC7156023]
    • Epub 2019 Jan 2. S0015-0282(18)32200-3. 
    • NCBI GEO accession GSE215421 (141 samples) = Bulk total RNA-seq of first trimester placenta (including 38 of the 39 samples in GSE109082, resequenced)

  12. Pisarska MD, Chan JL, Lawrenson K, Gonzalez TL, Wang ET. “Genetics and Epigenetics of Infertility and Treatments on Outcomes.” J Clin Endocrinol Metab. 2019 Jun 1;104(6):1871-1886. [PMID: 30561694, PMCID: PMC6463256]
  13. Sun T, Lee B, Kinchen J, Wang ET, Gonzalez TL, Chan JL, Rotter JI, Chen YI, Taylor K, Goodarzi MO, Rich SS, Farber CR, Williams J 3rd, Pisarska MD. “Differences in First Trimester Maternal Metabolomic Profiles in Pregnancies Conceived from Fertility Treatments.” J Clin Endocrinol Metab. 2019 Apr 1;104(4):1005-1019. [PMID: 30445606, PMCID: PMC6373171]
    • Epub 2018 Nov 15

  14. Gonzalez, Tania L., Tianyanxin Sun, Alexander F. Koeppel, Bora Lee, Erica T. Wang, Charles R. Farber, Stephen S. Rich, Lauren W. Sundheimer, Rae A. Buttle, Yii-Der Ida Chen, Jerome I. Rotter, Stephen D. Turner, John Williams III, Mark O. Goodarzi, Pisarska MD. “Sex differences in the late first trimester human placenta transcriptome.” Biol Sex Differ. 2018 Jan 15. 9:4. [PMID: 29335024; PMCID: PMC5769539; open access]
  15. Singh K, Williams III J, Brown J, Wang ET, Lee B, Gonzalez TL, Cui J, Goodarzi MO, Pisarska MD. "Up-regulation of microRNA-202-3p in first trimester placenta of pregnancies destined to develop severe preeclampsia, a pilot study.” Pregnancy Hypertension. 2016 Oct:10:7-9. [PMID: 29153693; PMCID: PMC5970562]
    • Epub 2017 May 8.

  16. Tania L Gonzalez, Yan Liang, Bao N Nguyen, Brian J Staskawicz, Dominique Loqué, and Ming C Hammond. “Tight regulation of plant immune responses by combining promoter and suicide exon elements.” Nucleic Acids Research. 2015 Jul 2. 43(14): 7152-61. [PMID: 26138488; PMCID: PMC4538838; open access]

  17. Colleen A Kellenberger, Stephen C Wilson, Scott F Hickey, Tania L Gonzalez, Yichi Su, Zachary F Hallberg, Thomas F Brewer, Anthony T Iavarone, Hans K Carlson, Yu-Fang Hsieh, Ming C Hammond. “GEMM-I riboswitches from Geobacter sense the bacterial second messenger cyclic AMP-GMP.” Proc Natl Acad Sci USA (PNAS). 2015 Apr 28. 112(17):5383-8. [PMID: 25848022; PMCID: PMC4418906; open access]

Acknowledged By:

  1. VanHise K, Chan JL, Wertheimer S, Handelsman RG, ..., Pisarska MD. "Regional Variation in Hormonal and Metabolic Parameters of White and Black Women With PCOS in the United States" J Clin Endocrinol Metab. 2023 Feb 15;108(3):706-712. [Journal link; PMID: 36218376; PMCID: PMC10210617]

  2. Gilkerson J, Kelley DR, Tam R, Estelle M, Callis J. "Lysine Residues Are Not Required for Proteasome-Mediated Proteolysis of the Auxin/Indole Acidic Acid Protein IAA1" Plant Physiol. 2015 Jun; 168(2):708–720. [PMID: 25888615; PMCID: PMC4453792]

  3. Gilkerson J and Callis J. "A genetic screen for mutants defective in IAA1-LUC degradation in Arabidopsis thaliana reveals an important requirement for TOPOISOMERASE6B in auxin physiology" Plant Signal Behav. 2014; 9(10):e972207. [PMID: 25482814]



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